I would suggest the lower seal purpose is to prevent, where possible, water entering the engine bay, and allow it to flow over the seal onto the scuttle and away down the appropriate drains...?
Correct! All modern windscreens are bonded directly to the bodywork with speacial windscreen adhesive. Any trims are only there as either cosmetic additions, or to aid the path of airflow or water!
As an ex-windscreen fitter myself, I can tell you that windscreens can be one of the most 'botched' job done to cars by so-called professionals. It's very worrying when you consider that the windscreen makes up a large % of a car structural rigidity, and is also relyed upon in most cars in the event of a passenger airbag activation (fires into the screen and then towards the passenger).
Omega's are a particularl tricky screen to install well. The glass is very curved and heavy, and the 2-piece trims rarely fit properly once removed (always insist on new trims!!)
I worked for Autoglass, and I will say that we were trained to a very high standard! But you can always get the 'Monday morning hangover' or 'Friday afternoon cba' jobs.
Personally, whichever company I use now, I stand over them like a hawk and make sure they do it right!!
